Tags:

    W Oct 24

    ChIP/RIP/Nuc-Seq

    LECTURE SLIDES
    Download file "PeakCalling_2012.ppt"

    REQUIRED READING:
    Pepke, WOld, and Mortazavi. Computation for ChIP-seq and RNA-seq studies. (2009) Nat Revs Genetics.
    Download file "Pepke_PeakCallingReview_NatMat_2009.pdf"
    Wilbanks & Facciotti. 2010. Evaluation of algorithm performance in ChIP-seq peak detection. PLoS ONE.
    Download file "Wilbanks_ChipSeqPLoSONE_2011.pdf"


    SUGGESTED READING:
    Park. 2012 ChIP-seq: advantages and challenges of a maturing technology. Nature Reviews Genetics.

    Rhee & Pugh. Genome-wide structure and organization of eukaryotic pre-initiation complexes. 2012. Nature. 483:295-301